GARLI – Genetic Algorithm for Rapid Likelihood Inference

What is GARLI?

GARLI, Genetic Algorithm for Rapid Likelihood Inference is a program for inferring phylogenetic trees. It performs phylogenetic inference using the maximum-likelihood criterion. Several sequence types are supported, including nucleotide, amino acid and codon.

Using GARLI

To use GARLI in parallel, please use the following commands or refer to the sample PBS scripts:

System	Version	Command
HPC2015	2.1	module load impi garli/impi/2.1

A sample PBS job command file can be copied from /share1/garli/sample/.

Additional Information

Official documentation can be obtained from GARLI Website