Investigation of the binding of virulence factors of important infectious pathogens with proinflammatory lipid molecules: Establishment of a novel mechanism of pathogen’s evasion of host defense and Search for new targets for therapeutic development


khsze - Posted on 19 December 2012

Project Description: 

Antibiotics-resistant bacterial infection becomes one of the major threats both locally and in the world. The increasing incidences of hospital-acquired and community-acquired cases of multi-drug resistant bacterial infections have alerted our community that these pathogens are quickly and increasingly resistant to multi-antibiotics currently used and antibiotics-resistant bacterial infection could develop into a serious epidemic situation. Therefore, there is an urgent need to look for new approaches and druggable targets for combating multi-drug resistant bacteria. We aim to carry out structure-function studies on the virulence factors of a number of important pathogens, including multidrug resistant Staphylococcus aureus, Mycobacterium tuberculosis,Legionella pneumophila, Penicillium marneffei and Aspergillus fumigatus then carry out in silico structure-based screening against a library of available compounds to develop drug inhibitors against these virulence factors of the pathogens.

Objectives: (1) Target virulence factor identification by clinical information combined with literature search and bioinformatics approaches, including sequence homology, structure homology and molecular docking. (2) Structure function studies of of virulence factor-lipid interaction (3) Drug lead development by in-silico structure-based screening and characterization of the inhibitors of target virulence factor.

Researcher name: 
Prof. Kwok Yung Yuen
Researcher position: 
Chair Professor
Researcher department: 
Department of Microbiology
Researcher email: 
Researcher name: 
Prof. Richard Yi Tsun Kao
Researcher position: 
Associate Professor
Researcher email: 
Research Project Details
Project Duration: 
09/2012 to 09/2015
Project Significance: 
The proposed multi-disciplinary research initiative falls in line with the University Strategic research theme of "Infection and Immunology". The success of this research plan will lay the molecular and structural foundation for delineating the role of virulence factors found in many intracellular pathogens and characterizing their binding with lipids, which is a largely unchartered property of these virulence factors. Improved knowledge in these subject areas will shed light on the host-pathogen interactions of these intracellular pathogens, including how they can exploit host lipids, how they can survive within the macrophage niche of the host and how they can evade the host immunity defense. Our characterization of their interaction with lipid molecules by cell-based and cell-free methods will provide important molecular and structural information to guide the structure-based screening of inhibitors against these virulence factors. The list of hit compounds produced will be useful leads for research to develop new and better chemotherapeutic intervention to combat multi-drug resistant bacteria, which is a growing threat both locally and globally. This project is supported by a a GRF grant titled "Investigation of the binding of cell wall proteins of Penicillium marneffei and Aspergillus fumigates with proinflammatory lipid signaling molecules: A mechanism of pathogen’s evasion of host defense?" (GRF765312M)
Remarks: 
HPC will be used to carry out NMR resonance assignments using in-house developed software, structure calculation of the protein and its complex with the lipid ligand molecules as well as in-silico virtual screening against a library of available compounds.