What is HYPHY?

HyPhy is an open-source software package for the analysis of genetic sequences using techniques in phylogenetics, molecular evolution, and machine learning. Additionally, HyPhy features support for our parallel computing environment.

Using HYPHY on hpc2015

To use HyPhy on hpc2015, use the following commands:

PATH=/share1/hyphy/2.2.7-gcc/bin:$PATH

Samples are located at /share1/hyphy/sample

Additional Information

Official documentation can be obtained from HYPHY website